Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVLIINGAKAFGHSGGKLNETLTHHAKKILESLGLEVDTTIVDKG--------------------YEKSQEVEKFFSADATIWQMPGWWMGEPWIVKKYIDEVFTSGHGKLYASDGRSSQNPTKNYGKGGLMQGKKYMLSLTWNAPIEAFNDPSEFFEGVGVDVVYLHLHKAFQFLGLSALPTFICNDVMKN--PQVEQYLNSLTVHLRQAFGK
3LCM Chain:A ((1-188))-MKILIVYTHPN----PTSFNAEILKQVQTNLSK-EHTVSTLDLYAEHFDPVLQFNETHKRRDLAKVAEMEKYRDLVTWADHLIFIFPIWWSGMPAILKGFIDRVFVADFAYSYKKV-----------GLEGHLQGKSAWIITTHNTPSFAMPF-----VQDY---GKVLKKQILKPCAISPVKLTELTSIEKISDDERQKLLHKVAQITRNILEH


General information:
TITO was launched using:
RESULT:

Template: 3LCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72450 for 1249 contacts (-58.0/contact) +
2D Compatibility (PS) -17298 + (NN) -1010 + (LL) 768
1D Compatibility (HY) -4400 + (ID) 1800
Total energy: -96190.0 ( -77.01 by residue)
QMean score : 0.604

(partial model without unconserved sides chains):
PDB file : Tito_3LCM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LCM-query.scw
PDB file : Tito_Scwrl_3LCM.pdb: