Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTASVFVAGKLLPETMEALSK---WDVKAFSGEENITEAELINNVTEVDAIICPLSSPISAKVLESA-KNLKIVANIGAGFDNIDVKKAQELGIAVTNTPDVSTEATAELTLGLILDVARRISEGDRLCRETPEQFKGWAPTFFLGTELSGKTLGIIGLGRIGQAVAKRAAAFGMNIIYSGHQPKEAA--KEWNAEFVSQKELLKRSDVVTIHAAYSPSLKHLLNETTLKTMKSSAFLINAARGPVVEEAALIKALETGVIAGAALDVFEFEPKIG-EDFAKLDNVVLTPHIGNATVETRAAMGKIAIANVEAVLAGKAPLHSVY |
2GCG Chain:A ((8-328)) | -LMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWK--PLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMPSEL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209377 for 2626 contacts (-79.7/contact) +
2D Compatibility (PS) -34465 + (NN) -16899 + (LL) 600
1D Compatibility (HY) -25600 + (ID) 5450
Total energy: -291191.0 ( -110.89 by residue)
QMean score : 0.555
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