Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEHQKRSPFPKDFLWGSASAAYQIEGAWDADGKGKSVWDEYVRIPG-TTFKGTNGDVAVDHYHRYKEDVKLMADAGLKAYRFSIAWTRIFPNGK-GEVNEAGLQFYDNLIDELLKYDIEPLVTLYHWDIPQALFDEYGGWESRQVIEDFTNYSTTLFKRYGDRVKYWVSLNEQNIFVGMGYGQ--ALHPPKVSDPKRMYAVNHIANLANASVIKAFHEIV---PDGKIGPSFAYTPHYPIDTDPKNVQAADDAEELNSYFWMDMYA--FGRYPKAVWKYLEEN--------DIAPVIEDGDMELLASAKPDFMGVNYYQSATVAYNPLDGVGQNNEMNFTGKKGSTKETGVPGVYKKVVNPFVKTTNWDWT-IDPKGLQIALRRINSRYA-LPILITENGLGEFDKLVDGEVNDDYRIDYLSAHATAIRDAI-SDGVDMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDVEDDAPMTRIPKKSYYWYKQVIETNGADL |
| 3VII Chain:A ((8-474)) | ----TVYTFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNEPLTFM-DGYASEIGMAPSINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGT-HDFLGINFYTALLGKSGVEGYE------PSR----YRD-SGVIL----TQDAAWPISASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG-----GLNDTGRVHYYTEHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFED--PA-RPRIPKESAKVLAEIMNTRKIP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183232 for 4062 contacts (-45.1/contact) +
2D Compatibility (PS) -47425 + (NN) -12073 + (LL) 1120
1D Compatibility (HY) -27600 + (ID) 7500
Total energy: -276710.0 ( -68.12 by residue)
QMean score : 0.542
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