Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEMTLAFIEEQYKELDNLNNKE-NPAVLTRNTSTGELFVRKIIPSSF-------APVIEQLKNLSSKYLPKIEVMIPKGNQLIVYEEYINGKNLADLMKTN-APFDTDEVTRLMLMLSDALTELHANAIIHRDIKPSNIMISS--DGVLKLIDFDASRMFEVGKNQDTVNLGTIGYAAPEQYGYSQTDARSDIYSIGVLMLELLLGKNTLPDKEH----------------------ATSLEKIAMQAGAFDPEQRYQSIQDFRTAVKNDSLGPSYVSELSDFTELDDSPTESAWKTPADEYENDFIPWYKHIPGFRTGTPWKMIVAVFGYMFLIFGLFSPPTEGVKMSHTVNFFSNFFLIVPAFVIFTNLCGIWSKLPLLKSPSPGTRKAGIVIYIIVCVSIYGIYNEIFS |
| 1KOB Chain:A ((48-303)) | -------SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT-VHDAL---------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85221 for 1594 contacts (-53.5/contact) +
2D Compatibility (PS) -24021 + (NN) -13224 + (LL) 9376
1D Compatibility (HY) -13200 + (ID) 2550
Total energy: -128840.0 ( -80.83 by residue)
QMean score : 0.486
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