Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LNLKDTVKL-ANGVEMPRLGFGVWKVQDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQAIKES----GIKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELDYVDLYLIHWPVKG--------------------KFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDA--EIAPMVNQIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGKLL--S---------NPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQNADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF |
1US0 Chain:A ((1-300)) | ---MASRILLNNGAKMPILGLGTWKSPP-GQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPD-RPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1US0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106729 for 2233 contacts (-47.8/contact) +
2D Compatibility (PS) -28752 + (NN) -13375 + (LL) 88
1D Compatibility (HY) -23600 + (ID) 5650
Total energy: -178018.0 ( -79.72 by residue)
QMean score : 0.552
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