Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAPNPTQVKYWDEMAKAYEK----ENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVY-SNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYDAASKGNAFVE---DGK-LVADDKAGTELLTFMSELQKNKLLLAS---------KATDPFETGTSIMADNGPWTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEAAMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAAN-V---PYSIPAMDDAKYNDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE |
| 3VXB Chain:A ((38-434)) | ------------------------------------TITAMVYGDD-AVKVQDKAASRFNASAEAKKANAKVKMERIPA-SDYPAKLRTAMGSPNAPDIFFNWGGGSIKAYKEAGQLVDLTDVIKSDEVLSTGFLPSVVAAGSL-DGHEYGIPMRGMQPVLLFYNKSVFAEHKLT-PPTTWDQLLDNVAKLKKAGVT--PFALG--GVEIWPE-L-MWLEYLVDRIGGPQVFDKIRNGDASGWGDPAVLKAAQTVKQLVDEGAFGKGFSSVSYNNGGAPALLAKGKAGMHLMGSWEYSTQLGKFPDFA-KKDLGWCAFPSFEGGAGDIRNVVGNPCNYWSVNARTGN--KDGAIAFLRDCASEA-YTKDLI-DNGDVPTTTIAENMLDSS----PNPEFAKFQYQLVQKAPNFTLSWDQAVDPDWQQPMLT-EINKLFVGKSSPEQFVSALKG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VXB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50854 for 3229 contacts (-15.7/contact) +
2D Compatibility (PS) -40146 + (NN) -20545 + (LL) 4200
1D Compatibility (HY) -12000 + (ID) 3450
Total energy: -122795.0 ( -38.03 by residue)
QMean score : 0.411
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