Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGRGPFMLDEIRKELD-INSYICYNGQYVIFE-GKEIYAKPLPTESLERLITVASEHEHPIVFSGKDSMRANLPDH---DR-VTIGM-----NSIKREYPKVDANYY-KGRD--IYQCLLFCDESY-DAY---YREEFKQYGFLRWHDVS-VDVCPADGSKAEGIKQMIKKLGFSMKDTYAFGDGLNDIAMLQTVGTGVAMGNGRDEVKAVADYVTSHVDDDGVYNALKQLKLI |
| 3DNP Chain:A ((6-275)) | -KQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHE--KYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKAFPAVDVI-RVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128155 for 2107 contacts (-60.8/contact) +
2D Compatibility (PS) -27872 + (NN) -13805 + (LL) 408
1D Compatibility (HY) -13600 + (ID) 2650
Total energy: -185674.0 ( -88.12 by residue)
QMean score : 0.539
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