Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIIRNKQELKEVILKQKQANKTIGFVPTMGFLHEGHMTLVSHARKESDFVVMSVFVNPTQFGPNEDFDAYPRDEAHDAKLAEEGGVDILFVPTVEEIYPTELSTKLHVD-KRVSVLDGADREGHFDGVVTVLTKLFHLVSPDNAYFGQKDAQQVAVVSGLVEDYFFPVNLRIIATVREADGLAKSSRNVYLTEKERKEAPVIHEALQLGRKLIESGETNQAKIVQMMTEKINEQTSHELIAYLAIYSYPEFTPVTDW----SKGIIIAAAVKYSKARLIDNELINVKRR |
| 3UK2 Chain:A ((5-283)) | MKVISSIQELRDQL----RGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKENVYVLFAPTERDMYPEPQEYRVQPPHDLGDILEGEFRPGFFTGVCTVVTKLMACVQPRVAVFGKKDYQQLMIVRRMCQQLALPVEIVAAETVRDADGLALSSRNRYLSEAERAEAPELAKTLARVRDAVLDGERDLAAIERRAVAHLSAR-GW-QPDYVSIRRRENLVAPSAAQIEAGDPLVVLTAAKLGATRLIDNLEI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UK2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175342 for 2227 contacts (-78.7/contact) +
2D Compatibility (PS) -29852 + (NN) -15223 + (LL) 956
1D Compatibility (HY) -15600 + (ID) 5300
Total energy: -240361.0 ( -107.93 by residue)
QMean score : 0.523
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