Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEHNKLKPFPKDFLWGSASAAYQVEGAWDEDGKGPSVWDEFVRIPG-TTFKETNGDVAVDNYHRYKEDVALMAEQGLKAYRFSVAWSRVIPHGN-GEVNEAGLKFYDNLIDELLSYGIEPVVTLYHWDIPQGLQDEYGGWESRKVVEDFTNYAALLFERFNGRVKYWVTLNEQNVFISHGYKL--AYHPPGVSDDKRMFAANHNANLANASAIAKFRELG---TSGKIGPSFAYGPSYSIDANPANVLASENSEEFNAHFWMDVYT--WGEYPTATWNWLEE--------HGLAPEILPGDTELLKKGKPDFMGVNYYRSMTHAFNGKDGVGSGKMNTTGEKGTSEETGVPGLYKNTNNPYLEKTNWDWD-IDPTGLRIGLRRITNRYK-LPIMITENGLGEYDSLTEDHKIHDEYRIEYIRAHALAIQEAI-TDGVEMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDENDEKELKRYKKDSFYWYKKTIEANGANLVEEQGK |
| 3VII Chain:A ((8-476)) | ----TVYTFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNEPLTFM-DGYASEIGMAPSINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYI-RGTHDFLGINFYTALLGKSGVEGYEP-------SRY--RD-SGVIL----TQDAAWPISASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG------GLNDTGRVHYYTEHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFED--PA-RPRIPKESAKVLAEIMNTRKIPER----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109079 for 4061 contacts (-26.9/contact) +
2D Compatibility (PS) -47185 + (NN) -11966 + (LL) 1188
1D Compatibility (HY) -29200 + (ID) 7600
Total energy: -203842.0 ( -50.20 by residue)
QMean score : 0.422
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