Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRFLDSDAMGDEELVERTLRPQYLREYIGQDKVKDQLKIFIEAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNLKQ-------------------TSGPA-----IEKS---GDLVAILND---LEPGDVLFIDEIHRMPMAVEEVLYSAMEDFYIDIMIGAGETSRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGHMEYYEENDLTEIIERTADIFEMKITYEAASELARRSRGTPRIANRLLKRVRDYAQIMGDGLIDDNITDKALTMLDVDHEGLDYVDQKILRTMIEMYNGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFIMRTRTGRVATDKAYEHLGYQRFDK |
1NJG Chain:A ((11-246)) | -------------QVLARKWRPQTFADVVGQEHVLTALANGLSL----GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPP------------------EHVKFLLATTDPQKLPVTILSRCL-QFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG----DGQVSTQAVSAMLGT---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101099 for 1568 contacts (-64.5/contact) +
2D Compatibility (PS) -22063 + (NN) -5041 + (LL) 8736
1D Compatibility (HY) -6400 + (ID) 2200
Total energy: -128067.0 ( -81.68 by residue)
QMean score : 0.481
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