Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLED----NYWYTAEPASDFYHKYPVDLALAEEYGVNGIRISIAWSRIFPTGYGEVNLKGVEFYHKLFEECHKRHVEPFVTLHHFDTPEALHSNGDFLNRDNIEHFVNYAAFCFEEFP-EVNYWTTFNEIGPIGDGQYLVGKFPPGIQYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPLDPENSADVRAAELEDIIHNKFILDATYLGYYSEMTMAGVKH-IL-KENGGELDLREEDFQALEAAKDLNDFLGINYYMSDWMQAFDGETEIIHNG-KGE----KGSSKYQIKGVGRRVAPDYVPKTDWDWIIYPQGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNT-VYDDGRIDYVKQHLEVLSEAISDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAHWYKQVAKTQIIE |
| 3W53 Chain:A ((42-504)) | -KFAWPKEFLWGSATAAAQIEGAGHSYGKEDSVWDAFARKEGAIAGGENLEVAVDHYHRYREDVQLMRELGLDSYRFSTSWARVVPGG-RTVNPEGLDFYSRLVDELLENGILPWLTLYHWDLPQALEERGGWTNRETSYKFLEYAETVHEKLGDRVKHWTTFNEPLCSSLIGYAAGEHAPGR-QEPQAALAAVHHQHLAHGLATARLRELGA-EHIGITLNLTNAVPNNPGDPVDLEAARRVDALWNRMYLDPVLRGSYPEDLLEDVQGLGLAEV------IEAGD---LEIISQPIDFLGVNHYHDDNVSGHPLPAGQPQPVVPTDSPKSSPFVGSEY--V-TFPA-RDLPRTAMGWEVNPEGLRVLLNRLNQDYANLPSLYITENGASYTDTVTEAGTVEDPEREEYILNHLDAVVRAIADGVDVRGYFVWSLLDNFEWAWGYAKRFGIIHVDYQTQVRTIKNSGKAYAGLIAANRT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174519 for 4047 contacts (-43.1/contact) +
2D Compatibility (PS) -48364 + (NN) -18896 + (LL) 344
1D Compatibility (HY) -16400 + (ID) 7500
Total energy: -265335.0 ( -65.56 by residue)
QMean score : 0.707
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