Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFFRMLKEDIDTVFDQDPAARSYFEVILTYSGLHAIWAHRIAHALYKRKFYFLARLISQVSRFFTGIEIHPGATIGRRFFIDHGMGVVIGETCEIGNNVTVFQGVTLGGTGKEKGKRHPTIKDDALIATGAKVLGSITVGEGSKIGAGSVVLHDVPDFSTVVGIPGRVVVQNGKKVRRDLNHQDLPDPVADRFKSLEQQILELKAELEDRKERINQK
4HZD Chain:A ((87-260))
-WSHVLRVDIQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGRKDFAYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLKSVPHNVTVAGVPARIIGETGCT------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4HZD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124885 for 1434 contacts (-87.1/contact) +
2D Compatibility (PS) -18718 + (NN) -6861 + (LL) 3428
1D Compatibility (HY) -14400 + (ID) 3900
Total energy: -165336.0 ( -115.30 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_4HZD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HZD-query.scw
PDB file :
Tito_Scwrl_4HZD.pdb
: