Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADLPE--ITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGE-------GVYALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIALVVADAGWKYLSTGAYAGSLDDAETALEGQLWA |
3X44 Chain:A ((2-310)) | -PLFNSILDTIGRTPIVRLQRMAP-E-------HTSVYVKVESFNPGGSVADRLALSVVLDAEAKGLLKPGDTIVECTSGNVGIALAMVAAARGYRFVAVMGDTYSVERRKLIRAYGGKLVLFPGHLGSKGGNLIADELAE-KYGWFRARQFDNPANPSYHRETTASEILADFAGKRLDHFVTGFGTTGTLTGVGQMLRVARPEVRVVALEPSNAAMLARGEWSPHQIQGLAPNFVPGVLDRSVIDDLVTMDEVTARDTSRRLAAEEGIFAGISAGATVATALSIA-EHA--PEGTVLLAMLPDTGERYLSTFLFDGVDEGS---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3X44.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137711 for 2764 contacts (-49.8/contact) +
2D Compatibility (PS) -32642 + (NN) -11346 + (LL) 1184
1D Compatibility (HY) -20800 + (ID) 5950
Total energy: -207265.0 ( -74.99 by residue)
QMean score : 0.465
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