Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNHTYRVIEIVGTSPDGVDAAIQGGLARAAQTMRALDWFEVQSIRGHLVDGAVAHFQVTMKVGFRLEDS
2UX9 Chain:A ((2-67))
--GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFALE--
General information:
TITO was launched using:
RESULT:
Template:
2UX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36241 for 411 contacts (-88.2/contact) +
2D Compatibility (PS) -7413 + (NN) -2798 + (LL) 76
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -55676.0 ( -135.46 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_2UX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UX9-query.scw
PDB file :
Tito_Scwrl_2UX9.pdb
: