Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSLQGKVVFITGAARGIGAEVARRLHNKGAKLVLTDLSKSELAVMGAELGGDDRLLTVVADVRDLPAMQAAAETAVERFGGIDVVVANAGIASYGSVLKVDPQAFRRVLDVNLLGNFHTVRATLPALID--RRGYVLIVSSLAAFAAPPGMAPYNMSKAGNEHFANALRLEVAHLGVSVGSAHMSWIDTALVRDTKADLPAFAELLARLPWPLNKTTSVNKCAAAFVNGIEGRKDRVYCPGWVALFRWLKPLLSTRVGQRPIRNTVAKLMPQMDAEVAALGRFASAYTESLENS |
3D3W Chain:A ((4-226)) | --FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC--PG-IEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNR--IPLGKFAEVEHVVNAILFLLSDR------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152441 for 1841 contacts (-82.8/contact) +
2D Compatibility (PS) -23829 + (NN) -9136 + (LL) 5180
1D Compatibility (HY) -13200 + (ID) 2900
Total energy: -196326.0 ( -106.64 by residue)
QMean score : 0.558
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