Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLMPHSAALNAARRSADLTALADGGALDVIVIGGGITGVGIALDAATRGLTVALVEKHDLAFGTSRWSSKLVHGGLRYLASGNVGIARRSAVERGILMTRNAPHLVHAMPQLVPLLPSMGHTKRALVRAGF-LAGDALRVLAGTPAATLPRSRRIPASRVVEIAPTVRRDGLDGGLLAYDGQLIDDARLVMAVARTAAQHGARILTYVGASNVTGT--SV-ELTDRRTRQSFALSARAVINAAGVWAGEIDPS------LRLRPSRGTHLVFDAKSFANPTAALTIPIPGELNRFVFAMPEQLGRIYLGLTDEDAPGPIPDVPQPSSEEITFLLDTVNTALGTAVGTKDVIGAYAGLRPLIDTGGAGVQGRTADVSRDHAVFESPSGVISVVG--G-KLTEYRYMAEDVLNRAITLRHLRAAKCRTRNLPLIGAPANPGPAPGSGAGLPESLVARYGAEAANVAAAATCERPTEPVADGIDVTRAEFEYAVTHEGALDVDDILDRRTRIGLVPRDRERVVAVAKEFLSR |
| 1Y56 Chain:B ((3-355)) | -----------------------PEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQ--FNDEANVRVMKRSVELWKKYS-EEYGFSFKQTGYLFLLYDD----------EEVKTFKRNIEIQN----KFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVK---TN-KGIIKTGIVVNATNAWANLINAMAGIKTKIPIEPYKHQAVITQPIKRGT-INPMVIS-F--KYGHAYLTQTFHGGIIGGIGYEIGPT---YDLTPTYEFLREVSYYFTKII-PALKNLLILRTWAGYYAKTPDSN------P-AIGRIE----ELNDYYIAAGFSGHGFMMAPAVGEMVAELITKG----------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195518 for 2989 contacts (-65.4/contact) +
2D Compatibility (PS) -36043 + (NN) -4790 + (LL) 10996
1D Compatibility (HY) -7600 + (ID) 2950
Total energy: -235905.0 ( -78.92 by residue)
QMean score : 0.351
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