Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGG-PGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANA-GPNTNSSQFFMVYRDS-KLPP--------QYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD |
3S6M Chain:A ((3-166)) | -------------------------------------------------------------------------------------------------------------------------------------------GSMVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVIN---GFMIQGGGFEPGLKQKPTDAPIANEANN------------GLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVE-GQDIVDKIKAVKTGS--HQDVPNDDVVIEKAVV- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3S6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -91671 for 1239 contacts (-74.0/contact) +
2D Compatibility (PS) -16195 + (NN) -10967 + (LL) 7812
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -120321.0 ( -97.11 by residue)
QMean score : 0.503
|
|
|