Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKGSMTAHATPNEPDYPPPPGGPPPPADIGRLLLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEGGTFLQRAIFHLPGLTAAVDELQRDFGSTVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIANHPD--LAAHVRPFGVPFIHIPATR-DTRTEAEQRQLQLLS-GNVDLVVLARYMQILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQRARERGVKLIGATAHYVTEVLDEGPIIEQDVVRVDHTHTVDDLVRVGADVERAVLSRAVLWHCQDRVIVHHNQTIVF |
| 3TQR Chain:A ((4-200)) | -----------------------------------------------------------------------------------------------------------------EPLPIVVLISGNGTNLQAIIGAIQKG-LAIEIRAVISNRADAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSLLPKYTGLNTHERALAAGETEHGVSVHYVT-DLDAGPLICQARLSITPQDTPETLKTRVHALEHIIYPEVLSWFAAGRLNYHNNQV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173291 for 1499 contacts (-115.6/contact) +
2D Compatibility (PS) -21324 + (NN) -13348 + (LL) 5428
1D Compatibility (HY) -7200 + (ID) 2650
Total energy: -212385.0 ( -141.68 by residue)
QMean score : 0.553
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