Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNPIQAPDGGQGWPAAALGPAQRAVAWKRLGTEQFDVVVIGGGVVGSGCALDAATRGLKVALVEARDLASGTSSRSSKMFHGGLRYLEQ-LEFGLVREALYERELSLTTLAP-----HL-VKPLPFLFPLTKRWWERPYIAAGIFLYDRLGG-AKSVPAQRHFTRAGALRLSPGLKRSSLIGGIRYY-DTVVDDARHTMTVARTAAHYGAVVRCSTQVVALLREGDRVIGVGVRDSENGAVAEVRGHVVVNATGVWTDEIQALSKQRGRFQVRASKGVHVVVPRDRIVSDVAMILRTEKSVMFVIPW-GSHWIIGTTDTDWNLDLAHPAATKADIDYILGTVNAVLATPLTHADIDGVYAGLRPLLAGESDDTSKLSREHAVAVPAAGLVAIAG---GKYTTYRVMAADAIDAAVQFIPARVAPSITEKVSLLGADGYFALVNQAEHVGALQGLHPYRVRHLLDRYGSLISDVLAMAASDPSLLSPITEAPGYLKVEAAYAAAAEGALHLEDILARRMRISIEYPHRGVDCAREVAEVVAPVLGWTAADIDREVANYMARVEAEVLSQAQPDDVSADMLRASAPEARAEILEPVPLD |
| 4YSH Chain:A ((2-355)) | --------------------------------THRYDVAIVGGGVIGAAIGFELAKRRHRVAIFEKGTMGSGASSAAAGMLGAQSEFSTSSPLVPLALQSRALMPALA-EELRERTGIDIGLVEKGLIKLATTEE-E------ADDLYRHYTFWRGIGEPVQWLTKGEALEMEPRLAEA-LAGAMYIPGDGQVSAPDLAAALAYAAASAGACLYEYTEVFDIRSDSSG-HVLDTT------GGTFAAEAVVIASGAWAARLGARVGL--SLSVYPVKGECVMVRAPVPLLQ-TTVFA--KNGCYIVPKSGNRLLIGATSTPGT---FDRRVSAGGVMNLLHRAAHLV-PDIEQAEWVASWSGIRPQTEDG---LPYLGEHP----ERRGLFVAAGHYRNGILLSPLTGLLVADLVERK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226759 for 3032 contacts (-74.8/contact) +
2D Compatibility (PS) -36066 + (NN) -2036 + (LL) 17576
1D Compatibility (HY) -10000 + (ID) 3400
Total energy: -260685.0 ( -85.98 by residue)
QMean score : 0.330
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