Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVE--NVSYGLTLCAECAVVCALHSTGG-GRLLALACVDGHGSVLMPCGRCRQVLLEHGGSE------LLIDHPVRPRRLGDLLPDAFGLDDLPRERR
1JTK Chain:A ((1-131))
---MNRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENA--AYSMCNCAERTALFKAVSEGDT-EFQMLAVAADTPGPVSPCGACRQVISEL-CTKDVIVVLTNLQGQIKEMTVEELLPGAFSSEDLH----
General information:
TITO was launched using:
RESULT:
Template:
1JTK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85893 for 910 contacts (-94.4/contact) +
2D Compatibility (PS) -13446 + (NN) -6107 + (LL) 164
1D Compatibility (HY) -6000 + (ID) 2200
Total energy: -113482.0 ( -124.71 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_1JTK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JTK-query.scw
PDB file :
Tito_Scwrl_1JTK.pdb
: