Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSWNHQSVEIAVRRTTVPSPNLPPGFDFTDPAIYAE--RLPVAEFAELRSAAPIWWNGQ----DPGKGGGFHDGGFWAITKLNDVKEISRHSDVFSSYENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFTPRAVGRLHDELQERAQKIAAEAAA---AGSGDFVEQVSCELPLQAIAGLLGVPQEDRGKLFHWSNEMTGNEDPEYA--HIDPKASSAELIGYAMKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYK---KVRPETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNPNPHVGFGGT-GAHYCIGANLARMTINLIFNAVADHMPDLKPI-SAPERLRSGWLNGIKHWQVDYTGRCPVAH |
| 2WM5 Chain:A ((23-435)) | -----------------PPEVPIADIELGSLDFWALDDDVRDGAFATLRREAPISFWPTIELVA--------GNGHWALTKYDDVFYASRHPDIFSSYPNITINDQT-----PELAEYFGSMIVLDDPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTNVILGFGDPDLATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNPNPHLGFG-GGGAHFCLGANLARREIRVAFDELRRQMPDVVATEEPARL-LSQFIHGIKTLPVTWS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154861 for 3297 contacts (-47.0/contact) +
2D Compatibility (PS) -42801 + (NN) -25326 + (LL) 1656
1D Compatibility (HY) -27600 + (ID) 7700
Total energy: -256632.0 ( -77.84 by residue)
QMean score : 0.459
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