Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARPLAMIAALGENRAIGIDNRLPWRLPADLKHFKAMTLG-------------KPVIMGRKTWDSLG---RPLPGRLNLVVSRQAGLAL---------------EG-AEVFASLDAALARAEAWAQAEDADELMLIGGAQLYAEAL--PR---AARLYLTRVGLAP-EGDAFFPEIDG-----AAWRLASSIEH---AAADDA-PAYAFEVWERR |
| 3RG9 Chain:A ((25-239)) | PLRPFSVVVASDEKGGIGDGGTIPWEIPEDMQYFRRVTTNLRGKNVKPSPSKRNAVVMGRKTWDSLPPKFRPLSNRLNVVLSRSATKEQLLAGIPDPIKRAEAANDVVAVNGGLEDALRMLVSKEHTSSIETVFCIGGGTIYKQALCAPCVNVLQAIHRTVVRPASNSCSVFFDIPAAGTKTPEGLELVRESITDERVSTGAGGKKYQFEKLVPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82757 for 1274 contacts (-65.0/contact) +
2D Compatibility (PS) -18082 + (NN) -2171 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 2650
Total energy: -115660.0 ( -90.78 by residue)
QMean score : 0.462
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