Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAPVEALFQPFRLGALELPTRVVMAPMTRNFSP-GGVPNAKVVEYYRRRAAAGVGLIVSEGTTVGHKAANGYPNVPRFYGEDALAGWKQVVDAVHAEGGRIVPQLWHVGSVRRLGVEPDASVPGYGPMEKAKD-GKVLVHGMSKADIQEVIAAFAQAARDAQAIGMDGVEIHGAHGYLIDQFFWEGSNQRDDEYGGSLANRSRFAVELVRAVRAAVGADFPIIFRFSQWKQQDYSARLVETPEGLREFLAPLVEAGVDIFHCSTRRFWIPE-FEGSELN--LAGWTRELTGKPTITVGNVGLDGSEFLQFFGKTDEVAQPASIDGLVERLDKGEFDLVAVGRALLVDPEWAVKVREGRIGDIKPFSREALASLV |
| 3KRU Chain:A ((2-331)) | -----SILHMPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRG-RITDHDLGIWNDEQVKELKKIVDICKANGAVMGIQLAHAGRKCNISY----EDV-VGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDY--MEGGI--NIDMMVEYINMIK-DKVDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQ------------ELAE--------EILSNERADLVALGRELLRNPYWVLHTYTSKEDWPKQYERAFK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147249 for 2917 contacts (-50.5/contact) +
2D Compatibility (PS) -35740 + (NN) -14238 + (LL) 1908
1D Compatibility (HY) -20400 + (ID) 4700
Total energy: -220419.0 ( -75.56 by residue)
QMean score : 0.547
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