Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNILISGAASGIGAASARLFHRRGWRVGLLDIDAEALRGLAAQL-PGAWHRAVDVSEPDAVGEALAQFCA-DGRLRLLFNCAGVLRFG-RFEEVALEDHARLLAINLHGVLNCCHAAFPFLRATP----QAQVLNMGSASGLYGVPEMAVYSASKFAVRGLTEALELEWRRHGIRVADLMPPFVRTPMVAGQAYQPPVLRRLGLRLDAEDIAEAAWRHAHSRRVHRPVGGLFTALYWAGQLSPPWVNRAVMAWLSRG
3N74 Chain:A ((5-239))
GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPV-----------------IPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSI------------------
General information:
TITO was launched using:
RESULT:
Template:
3N74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140647 for 1704 contacts (-82.5/contact) +
2D Compatibility (PS) -21894 + (NN) -10269 + (LL) 1868
1D Compatibility (HY) -9200 + (ID) 2900
Total energy: -183042.0 ( -107.42 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3N74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N74-query.scw
PDB file :
Tito_Scwrl_3N74.pdb
: