Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLFSAVEMAPRDPILGLNEAFNADTRPGKINLGVGVYYNEEGRIPL--LRAVQAAEKARIE-AHAPRGYLPIEGIAAYDQGVQKLLFGNESELLAAG--RVVTTQAVGGTGALKLGADFLKRL-----LPDATVAISDPSWENHRALFEAAGFPVQNYRYY-DAASNGVNRAGLLEDLNALPARSIVVLHACCHNPTGVDLELDDWKQVLDVLKAKGHVPFLDIAYQGFGNGIEE-DAAAVRLFAQSGLSFFVSSSFSKSFSLYGERVGALSIVTESRDESARVLSQVKRVIRTNYSNPPTHGASVVSSVLNSPELRALWEQELGEMRDRIRDMRLAMVEQLAAHGAKRD-FSFVGRQRGMFSYSGLTADQVERLKTEFGIYAVSTGRICVAALNKSNLETITKAIVQVL |
| 1AJS Chain:A ((3-390)) | PSVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDD--CQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVG--GVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP-GTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMC------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AJS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171736 for 3020 contacts (-56.9/contact) +
2D Compatibility (PS) -41667 + (NN) -29595 + (LL) 2288
1D Compatibility (HY) -28000 + (ID) 7550
Total energy: -276260.0 ( -91.48 by residue)
QMean score : 0.604
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