Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKRLLIAACTLLFAGSLLAATPAAKPHVLIATSLGEIEVELDPAKAPISVKNFLEYVDSGYYDGTLFHRVIPGFMVQTGGFSAGMQE-KKT-RAPIKNEADNGLLNE-RGTLAMARTG--VVDSATSQFFINLTDNDFLNHGARDFGYAVFGKVVRGMGVVDQIAKVPTTRRNGFADVPSDDVVILSAKRL
2POE Chain:A ((15-174))
------------------------YFQGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIYGRYFDDEIYPELKYDRRGILSMASKGAKKPNTNGSQFFITYSSLPQLN-----GEYVIFGKLIDGFETLNTLENCPSDK----SHKPIDEIIIKDIVIH
General information:
TITO was launched using:
RESULT:
Template:
2POE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65339 for 1209 contacts (-54.0/contact) +
2D Compatibility (PS) -16066 + (NN) -1411 + (LL) 2644
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -92122.0 ( -76.20 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_2POE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2POE-query.scw
PDB file :
Tito_Scwrl_2POE.pdb
: