Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLTLFRDYPNGRYAMTFDVIIVGGSYAGISAGMQLARARRRVLVMDTGLRRNRF--ARASHGFLGQDGRDPAAIADDARAQLLAYPSVEWLS-EAAVAAKKE---ADGFVVKAANGERFTARRLILASGVADELPEIPGLAERWGRHVFHCPYCHGYELDGGPIGVLAASPLAIHHALMLPDWGA-TTFFLNGVF-EPDAEQMSRLDR-RGVTIERE-AVVALGGAR---ADVTLAS---G--RTITLAGLFTQPRTRMASPLAALLGCEFEDGPSGPFIRTDGMRETSVPGVFACGDAAL-AAGNVAIAVGDGARTGGAAHHSLLFR |
1HYU Chain:A ((202-518)) | ------RAAEALNKRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF-GGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQ-IETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEG-ALERNR--MG-EIIIDAKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194828 for 2498 contacts (-78.0/contact) +
2D Compatibility (PS) -31297 + (NN) -4563 + (LL) 824
1D Compatibility (HY) -7200 + (ID) 3400
Total energy: -240464.0 ( -96.26 by residue)
QMean score : 0.417
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