Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLRSLASPAALTDPKRCASVVGVAAFAVRREHAPDALGGPPGL-PAPRGFRAAFAAAYAVAYLA-GGERRMLRLIRRYGPIMTMPILSLGDVAIVSDSALAKEVFTAPTDVLLGGEGVGPAAAI--YGS--GSMF-VQEEPEHLRRRKLLTPPLHGAAL--DRYVPIIENSTRAAMHTWPV--DRPFAMLTVARSLMLDVIVKVIFGVDDPEEVRRLGRPFE---RLLNLGVSEQLTVRYALRRLGALRV-WPARARANTEIDDVVMALIAQRRADPRL-GERHDVLSLLVSARG----ESGEQLSDSEIRDDLITLVLAGHETTATTLAWAFDLLLHHPDALRRVRAEAVGG-------------GEAFTTAVINETLRVRPPAPLTA-RVAAQPLTIGGYRVEAGTRIVVHIIAINRSAEVYEHPHEFRPERFLGTRP---QTYAWVPFGGGVKRCLGANFSMRELITVLHVLLREGEFTAVDDEPERI--VRRSIMLVPRRGTRVRFRPAR |
| 3TBG Chain:A ((9-475)) | -------------------------------------GKLPPGPLPLPGLGNLLH-------VDFQNTPYCFDQLRRRFGDVFSLQLA-WTPVVVLNGLAAVREALVTHGEDTADRPPVP-ITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPS-PYELCAVPR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227035 for 3485 contacts (-65.1/contact) +
2D Compatibility (PS) -46103 + (NN) -25168 + (LL) 4052
1D Compatibility (HY) -16400 + (ID) 4600
Total energy: -315254.0 ( -90.46 by residue)
QMean score : 0.458
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