Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRTVLVLNGPNLNLLGTREPQTYGRRTLGEIADECAAFAETRGFAVDFRQTNQEGQLLDWIHQARGR-VAGIVINPAAWTHTSVALRDALAAVELPVVEVHLSNVHQREAFRHHSYVSPVALGVICGFGSLGYRLALEHFAERFEAAA
2UYG Chain:A ((2-142))
----VLILNGPNLNLLGRREPEVYGRTTLEELEALCEAWGAELGLGVVFRQTNYEGQLIEWVQQAHQEGFLAIVLNPGALTHYSYALLDAIRAQPLPVVEVHLTNLHAREEFRRHSVTAPACRGIVSGFGPLSYKLALVYLAETL----
General information:
TITO was launched using:
RESULT:
Template:
2UYG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154932 for 1232 contacts (-125.8/contact) +
2D Compatibility (PS) -15094 + (NN) -2609 + (LL) 948
1D Compatibility (HY) -14800 + (ID) 3900
Total energy: -190387.0 ( -154.53 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_2UYG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UYG-query.scw
PDB file :
Tito_Scwrl_2UYG.pdb
: