Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGQELCAKTVQPGCSCYHCSEGGEAHSCRRSQPETTEAAFKLTDLKEASCSMTSFHPRGLQAARAQKFKSKRPRSNSDCFQEEDLRQGFQWRKSLPFGAASSYLNLEKLGEGSYATVYKGISR--INGQLVALKVISMNAEEGVPFTAIREASLLKGLKHANIVLLHDIIH--TKETLTFVFEYMHTDLAQYMSQH----PGGLHPHNVRLFMFQLLRGLAYIHHQHVLHRDLKPQNLLI----SHLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDALLGATEYSSELDIWGAGCIFIEMFQGQPLFPGVSNI----LEQLEKIWEVLGVPTEDTWPGVSKLPNYNPEWFPL----PTPRSLHVVWNRLGR--VPEAEDLASQMLKGFPRDRVSAQEALVHDYFSALPSQLYQLPDEESLFTVSGVRLKPEMCDLLASYQKGHHPAQFSKCW |
4F6U Chain:A ((27-341)) | ----------------------------------------------------------------------------------------------------------CKVGRGTYGHVYKAKRKDGKDDKDYALKQIE---GTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASK-VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF--------------VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE-NPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFL------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147303 for 2003 contacts (-73.5/contact) +
2D Compatibility (PS) -28752 + (NN) -14488 + (LL) 8540
1D Compatibility (HY) -26400 + (ID) 4600
Total energy: -213003.0 ( -106.34 by residue)
QMean score : 0.384
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