Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK--APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS-LPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE |
| 3EB0 Chain:A ((6-327)) | --SKKYSLGKTLGTG-FGIVCEVFDIESGKRFALKKVLQDPR---------YKNRELDIMKVL---DHVNIIKLVDYFYTT----NKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHY--VRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSIP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -178071 for 2116 contacts (-84.2/contact) +
2D Compatibility (PS) -30675 + (NN) -21023 + (LL) 220
1D Compatibility (HY) -27200 + (ID) 4300
Total energy: -261049.0 ( -123.37 by residue)
QMean score : 0.558
|
|
|