Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESNYNADAIKILRGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDESLAGYCDKIEVSINEDGSVSVTDNGRGIPTDIHKEEGISAAEVIMTQLHAGGKFDSNTYKVSGGLHGVGISVVNALSSWLELTIWRNKKEHFMRFEDGESIEPLKIVNKN-TNKRGTRVTFMPSTETFSSIDFSYSTLENRIRELAFLNSSINITLRDLRNKPYIESHFNDSKQSKDNFGTANFVRYLDKNKTHV-TKITSMKGDAKDLGISIEISMEWNDSY-YEHMLCFTNNIRQRDGGTHLAGFRSALTRCINNYATDEGFLKKAKVSLTGEDVREGLTCVLSLKMPDPKFSSQTKDKLVSSEARTVVESIVFDKLSTILETDPKLAASIVERVIRSAKGREAARKARELVKNKNSIDISTLPGKLADCQEKVPELSELFIVEGNSAGGTAKQGRNRKTQAVLALRGKILNVERVSLDRIFSSAEIGSLITAIGAGIGSEHFDIEKTRYHKIIIMTDADVDGSHIRTLILTFFFRYMREVIERGYLYIAQPPLYKVTKNAEDTYIKDDETFEKYIVNLAVKKLTLNSTGRGLRFILSKCLSISNISKNYSRGIPQNLLESLLILSKKNALSSANEILKYLKLMYSEYNWEVEIKDEEREVHISKLFQGLADKYVFPLSMLDSKEIRNILSSLDDVIDLFNGDSFLKSQETEIKIRSPSALAKIVMDYGKKGLTLQRFKGLGEMNADQLWDTTLNPETRTLLKVEIKDCEEADSIFSVLMGDIVEPRRNFINNNALNVYDVDI |
1S16 Chain:A ((4-383)) | ---TYNADAIEVLTGLEPVRRRPGMYTDTT----RPNHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINNT--------EQRWCYQDGLNDYLAEAVNGLPTLPEKPFIGNFA-GDT-EAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNILPR-GVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMRA--A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1S16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -135807 for 3144 contacts (-43.2/contact) +
2D Compatibility (PS) -40829 + (NN) -12907 + (LL) 28744
1D Compatibility (HY) -24800 + (ID) 6850
Total energy: -192449.0 ( -61.21 by residue)
QMean score : 0.530
|
|
|