Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILKGSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
3ACD Chain:A ((5-179))
FTPGNGPVQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAIS------------ELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSRRQVEVPIHYLGFEIEDAYVYGYGLDRAQFDRNLPFITSIRPE----
General information:
TITO was launched using:
RESULT:
Template:
3ACD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118291 for 1289 contacts (-91.8/contact) +
2D Compatibility (PS) -17747 + (NN) -4426 + (LL) 244
1D Compatibility (HY) -18400 + (ID) 3100
Total energy: -161720.0 ( -125.46 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_3ACD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ACD-query.scw
PDB file :
Tito_Scwrl_3ACD.pdb
: