Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWH-LPNDLKHVKKLST------------------------GHTLVMGRKTFESIG---KPLPNRRNVVLTSDTSFN--VEGVDVIHSIEDIYQLP-----GHVFIFGGQTLFEEMID--KVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
2BL9 Chain:A ((26-238))
-TKNEPFSPRTFRGLGNKGTLPWKCNSVDMKYFSSVTTYVDESKYEKLKWKRERYLRMEAKLQNVVVMGRSSWESIPKQYKPLPNRINVVLSKTLTKEDVKEKVFIIDSIDDLLLLLKKLKYYKCFIIGGAQVYRECLSRNLIKQIYFTRINGAYPCDVFFPEFDESEFRVTSVSEV--YNSKGTTLDFLVYSKV-
General information:
TITO was launched using:
RESULT:
Template:
2BL9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70446 for 1035 contacts (-68.1/contact) +
2D Compatibility (PS) -16493 + (NN) -2344 + (LL) 512
1D Compatibility (HY) -12400 + (ID) 2550
Total energy: -103721.0 ( -100.21 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_2BL9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BL9-query.scw
PDB file :
Tito_Scwrl_2BL9.pdb
: