Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAVVIENYGGKEELKEKEVAMPKAGKNQVIVKEAATSINPIDWKLREGYLKQMMDWEFPIILGWDVAGVISEVGEGVTDWKVGDEVFARPETTRFGTYAEYTAVDDHLLAPLPEGISFDEA--ASIPLAGLTAWQALFDHAKLQKGEKVLIHAGAGGVGTLAIQLAKHAGAEVITTAS-AKNHELLKSLGADQVIDYKEVNFKDVL------SDIDVVFDTMGGQIETDSYDVLKEGTGRLVSIVGISNED-R-AKEKNVTATGIW-------------LQPNGEQLKELGKLLANKTIKPIVGATFPFSEKGVFDAHALSETHHAVGKIVISFNK |
1WLY Chain:A ((2-332)) | VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRA----------PPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLP--PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRP-RGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVAKTFPLRE--AAAAHKYMGGRQTIGSIVLLPQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153146 for 2543 contacts (-60.2/contact) +
2D Compatibility (PS) -31690 + (NN) -6909 + (LL) 768
1D Compatibility (HY) -18000 + (ID) 4500
Total energy: -213477.0 ( -83.95 by residue)
QMean score : 0.539
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