Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAPNPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNDVKGLDDV-VKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYDAASKGNAFVE-DGKLVADDKAGTELLTFMSELQKNKLLLAS------KATDPFETGTSIMADNGPWTFPNWDEKFP-ELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEAAMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAANVPYSIPAMDDAKYNDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE |
| 3UOR Chain:A ((27-412)) | ----------------------------------KTTVRFWAMGK--EAEVVAELVADFEKQNPTIHVDVQNIPM-TAAHEKLLTAFAADGLPDVCQ-LGNTWLPEFALLDTLEPMQPYVARSKIVDPADYFPGVWDTNLV-DGTLYGVPWYVDTRLLFYRKDLLREAGYSQMPKTWAEMEQVMAAIKRKVGP-DRYAILMPLN-EF-E---QQLS-FALQQDDRLLRDHDNYGNFRGAGFRKALGFYDNMYQQGWAPKVSETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGME--GNWGTAPLPGPNGL-----GAGIAGGSSLVIFKSSQH--KDASWKLIEYLSQPQ-VQARFHAIIGDLPPRRSTWKLPSLAN----DALAHAFGDQLERVKATPKVLEWERIVQEMRL-VTERVVRGGQSHDAAVQELDQRVDEILA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69320 for 3262 contacts (-21.3/contact) +
2D Compatibility (PS) -40021 + (NN) -13890 + (LL) 3304
1D Compatibility (HY) -16000 + (ID) 3250
Total energy: -139177.0 ( -42.67 by residue)
QMean score : 0.463
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