Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNP--MLEEII--HQKRRVIILNKADTADEKT---TKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIRAMILGIPNVGKSTLINRLAKKNIA----RTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFEDQEIGYKLALTGAIKDDLLQMEEIAGYGLRFLENHYPDRLQTWLKVETVSEDPIETLAFIAEKRGLLDRYNDPDYSRAAETVVREIRQQKLGRMSFDFPNWEDEVE |
2YV5 Chain:A ((74-230)) | -----------------RPKVANVDRVIIVETLKMPEFNNYLLDNMLVVYEYFKVEPVIVFNKIDLLNEEEKKELERWISIYRDAGYDVLKVSAKTGEGIDELVDYLE------------------GFICILAGPSGVGKSSILSRLTGEELRTQEV-------TTTGVRLIPFGKGSFVGDTPGFSKVE------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84668 for 1032 contacts (-82.0/contact) +
2D Compatibility (PS) -14446 + (NN) -1784 + (LL) 10556
1D Compatibility (HY) -8800 + (ID) 1650
Total energy: -100792.0 ( -97.67 by residue)
QMean score : 0.519
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