Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRNEYNDDSI-QVLEGLEAVRKRPAMYIGSTDV-RGLHHLVYEIVDNSVDETLAGFGK---KIVVTLHEDG--SVSVSDEGRGMPVGMH-KTGKSTVEVILTVLHAGGKFGQEGGYK----TSGGLHGVGSSVVNALSEWLVVTINRDGATYQQKFKDGGKPDGTLKKIGKSKA-----TGTTIRFKPDPAIFPTTSFNYETLSERLRESAFLLKGMLIELIDERVGMAEAFHFEEGVKNFVEYINEGKDVLHPVASFEGENATIEVEMAFQFNDGYSENILSFVNNVRTRGAGSHESGMKAAMTRIFNDYARRVNLLKEKDKNLEGSDIREGLSAVLSIRVPEKILQFEGQTKEKLGTQEARQAVDAVVAEHLAYFLAENPETSSLLVKKAVKAREAREAARKAREETRNGKKKKRSETLLSGKLTPAQSRNPNKNELYLVEGDSAGGSAKQGRDRRFQAILPLRGKVINTEKAKLQDILKNEEISTIIHTVGAGVGTEFDVEDCNYDKVVIMTDADTDGAHIQVLLLTFFYRYMRPLVEAGKVFIALPPLYKVSRGSGKKEVIEYAWTDEELDSAIQKIGKGYMIQRYKGLGEMNADQLWETTMNPDTRTLIRVRVDDSARAERRVATLMGDKVEPRRQWIEKHVEFSMEDSQNILENENMMVEEAKDI |
| 1KIJ Chain:A ((7-218)) | ---------AIR-VLKGLEGVRHRPAMYIGGTG-VEGYHHLFKEILDNAVDEALAG---YATEILVRLNE--DGSLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGGKFEQ-----GAYKVSGGLHGVGASVVNALSEWTVVEVFRE--GKHHRIAFS--RGEVTEPLRVVGEAPRGKTGTRVTFKP---DPEIFG-------N-LRFDPSKIRARLREVAYLVAGLKLVFQD-RQH--GKEEVFLDKG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66473 for 1504 contacts (-44.2/contact) +
2D Compatibility (PS) -20943 + (NN) -7256 + (LL) 30844
1D Compatibility (HY) -12800 + (ID) 4450
Total energy: -81078.0 ( -53.91 by residue)
QMean score : 0.394
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