Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERNEVLKKVEAAM----PNARFKHTLGVEKAAVELAEHYHMDVEKARITALLHDYAKYYDDDKARKIIEDEGYDPRLLSFHHSLWHAPVGAYLAEKEFGITD---TEILEAIRLHTTGSA-----TMSDFDKLIYLADYTEQGRTFPGVYKARRLALKSLDEAMLFALSNTITHLVKKQQLVFPDTLDAYNYFVNLNLEGDY |
| 2PJQ Chain:A ((8-127)) | ---TAIQTYALQKLAHDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVID---------------------------AHQ-DLIVQLNA-QNVTADDQTAIFAIIDHMSFSKSFNGPQKLSLEGQVVQDADRLDA------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -28675 for 724 contacts (-39.6/contact) +
2D Compatibility (PS) -10734 + (NN) -6449 + (LL) 6104
1D Compatibility (HY) 1200 + (ID) 750
Total energy: -39304.0 ( -54.29 by residue)
QMean score : 0.566
|
|
|