Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTKKES-NIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDA-LQDKPSK
2O66 Chain:A ((11-125))
-SKFYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGFG---------------EDKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIFVLPVSDVIRVRTGERGEKAE-------
General information:
TITO was launched using:
RESULT:
Template:
2O66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55319 for 638 contacts (-86.7/contact) +
2D Compatibility (PS) -11270 + (NN) -7357 + (LL) 1416
1D Compatibility (HY) -8400 + (ID) 2050
Total energy: -82980.0 ( -130.06 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_2O66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O66-query.scw
PDB file :
Tito_Scwrl_2O66.pdb
: