Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIIRNKQELKEVILKQKQANKTIGFVPTMGFLHEGHMTLVSHARKESDFVVMSVFVNPTQFGPNEDFDAYPRDEAHDAKLAEEGGVDILFVPTVEEIYPTELSTKLHVD-KRVSVLDGADREGHFDGVVTVLTKLFHLVSPDNAYFGQKDAQQVAVVSGLVEDYFFPVNLRIIATVREADGLAKSSRNVYLTEKERKEAPVIHEALQLGRKLIESGETNQAKIVQMMTEKINEQTSHELIAYLAIYSYPEFTPVTDWSKGIIIAAAVKYSKARLIDNELINVKRR
3N8H Chain:A ((4-261))MIIADNIKQFHSIRNSL-IKQQKIGFVPTMGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASLDVDVLFNPSEKDIYPDGNLLRIEPKLEIANILEGKSRPGHFSGMLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQRQPSGLPLSSRNKNLTSTDIEIANKIYEILRQDDFSNLEE----------LTNKINST-GA-KLQYIQK-------------LNNRIFLAFYIGKVRLIDNFLKETG--


General information:
TITO was launched using:
RESULT:

Template: 3N8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110089 for 2049 contacts (-53.7/contact) +
2D Compatibility (PS) -27659 + (NN) -6974 + (LL) 2008
1D Compatibility (HY) -18000 + (ID) 4600
Total energy: -165314.0 ( -80.68 by residue)
QMean score : 0.403

(partial model without unconserved sides chains):
PDB file : Tito_3N8H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N8H-query.scw
PDB file : Tito_Scwrl_3N8H.pdb: