Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTVKLNNGVEVPILGFGTYQITDAAEAEHAVKDAIKAGYRHIDTAQSYMNEEAVGRGIAAS----GVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYVDLLLIHQPFN----------------DVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFNEVTPQVNQIEVNPFQQQTANLAILRKEGVAIEAWAPFAEGKN-----DIFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVKPERMAQNLAIFDFELTEADKEEIAGLDQGESQFFSHADPEMVKWMASRKLNV |
| 3H7U Chain:A ((26-308)) | -TFFKLNTGAKFPSVGLGTWQASP-GLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDLFITSKLWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGSPGTTWLKSDVLKNPILNMVAEKLGKSPAQVALRWGLQMGHSVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIEQA----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131698 for 2220 contacts (-59.3/contact) +
2D Compatibility (PS) -28020 + (NN) -11944 + (LL) 2256
1D Compatibility (HY) -20800 + (ID) 5200
Total energy: -195406.0 ( -88.02 by residue)
QMean score : 0.553
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