Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADYAGKNPLLVGVLKGSVPFMAELLKHIDTHVE------------IDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
3OZF Chain:A ((56-244))
--KKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQ-STGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKK
General information:
TITO was launched using:
RESULT:
Template:
3OZF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118465 for 1354 contacts (-87.5/contact) +
2D Compatibility (PS) -19285 + (NN) -6098 + (LL) 436
1D Compatibility (HY) -16400 + (ID) 2700
Total energy: -162512.0 ( -120.02 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_3OZF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OZF-query.scw
PDB file :
Tito_Scwrl_3OZF.pdb
: