Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKNAYAKSGVDVEAGYEVVERIKKHVARTERAGVMGALGGFGGMF-DLSQTGVKEPVLISGTDGVGTKLMLAIKY-------DKHDTIGQDCVAMCVNDIIAAGAEPLYFLDY-VATGK--NEPAKLEQVVAGVAEG---CVQAGAAL--IGGETAEMPGMYGEDDYDLAGFAVGVAEKSQIIDGSKVKEGDILLGLASSG-----------IHSNGYSLVRRVFADY------TGDEVL---------------PE--LEGKQLKDVLLEPTRIYVKAALPLIKE--ELVNGIAHITGGGFIENVPRMFADDLAAEIDEDKVPVLPIFKALEKYGDIKHEEMFEIFNMGVGLMLAVSPENVNRVKELL---DEPVYEIGRIIKKADASVVIK |
| 3KIZ Chain:A ((28-377)) | ---------------------------DKGI-YPRAF------CKIIPDIL-GGDPEYCNIMHADGAGTKSSLAYVYWKETGDISVWKGIAQDAVIMNIDDLICVGAVDNILLSSTIGRNKNLIPGEVLAAIINGTEEVLQMLRDNGIGIYSTGGETADVGDLVR--TIIVDSTVTCRMKRQDVISNENIKAGNVIVGFASYGQTSYETEYNGGMGSNGLTSARHDVFNNVLASKYPESFDPKVPENLVYSGEMNLTDPYLNVPLDAGKLVLSPTRTYAPLMKEIIHQYKGKLDGVVHCSGGGQTKVLH-FT-DATTHIIKDNLFDVPPLFQLIQGQSNTPWEEMYKVFNMGHRLEIYTDAAHAEGMIAIAKKFNIEAKIIGRVEAPVAGKRLTI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KIZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161537 for 2461 contacts (-65.6/contact) +
2D Compatibility (PS) -31000 + (NN) -6616 + (LL) 2488
1D Compatibility (HY) -9200 + (ID) 3500
Total energy: -209365.0 ( -85.07 by residue)
QMean score : 0.431
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