Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METYTLSNTLNIPKIGFGTWQLTEGEEAYKAVTHALKVGYTHIDTAQIYGNEHSVGRAIRDS------GLARESIFLTTKIWNDKHDYHLAKASIDESLQKLGVDYIDLLLIHWPNPKALRE-----------ND-AWKAGNAGTWKAMEEAYKEGKVKAIGVSNFMKHHLEALFETAEIKPMVNQIILAPGCAQEDLVRFCKGNDILLEAYSPFGTGAIFE--------NESIKAIAEKYGKSVAQVALRWSLDN----GFLPLPKSATPKNIEANLDIFDFQLNEDDITTLIQLDSGI--KPKDPDNVSF |
| 3KRB Chain:A ((21-328)) | -------SMQYPPRLGFGTWQAP-PEAVQTAVETALMTGYRHIDCAYVYQNEEAIGRAFGKIFKDASSGIKREDVWITSKLWNYNHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPNDATVKFCLDNGIGVTAYSPMGGSYA--TQKNVILECKTLKAIADAKGTSPHCVALAWHVKKWNTSMYSVIPKSQTPARIEANFKCTEVQLSDDDMDAINNIHLNKRIRFCDPAIFWK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -96824 for 2275 contacts (-42.6/contact) +
2D Compatibility (PS) -28963 + (NN) -10113 + (LL) 996
1D Compatibility (HY) -19200 + (ID) 5250
Total energy: -159354.0 ( -70.05 by residue)
QMean score : 0.545
|
|
|