Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKIGVSLIVLIMLIIFLAGCNKNEQNGDETKMQSLVGYVVLKDNERAILITDTKAPGKEDYNLSEGQLMNKFKNNIVIVGLSEIDNTDDLKRGEKIKVWFHTRKESNPPSATIQKYELL
5DOI Chain:E ((4-125))-----------NFELVFLKELPSLPDFS-----KVCFTGLILSFSKIAIIQDST----------GEAELFLDISVFKAITGIGVLKKQVCKIIVERFRII-HSADEEMLQYLLIQKYKLS


General information:
TITO was launched using:
RESULT:

Template: 5DOI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 444 -56762 -127.84 -610.34
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain E : 0.63

3D Compatibility (PKB) : -127.84
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.432

(partial model without unconserved sides chains):
PDB file : Tito_5DOI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DOI-query.scw
PDB file : Tito_Scwrl_5DOI.pdb: