Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITVKNIRKAFKDLVVLDGIDLEVKRGEVVAIIGPSGSGKSTLLRCLNLLERPDQGLIEIGEAKLNAEKFTRKEAHRLRQQTAMVFQNYNLFKNKTALQNITEALIVAQHKPRDEAKRIGMEILKQVGLEHKADSYPITMSGGQQQRIGIARALAVNPHAILLDEPTSALDPELVTGVLQVIKSIA-EKQTTMIIVTHEMAFAKEVADQVIFMADGHIIEQGTPEELFDHPKNERTKRFIKQVGEPAELI
3FVQ Chain:A ((4-238))ALHIGHLSKSFQNTPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSKN---TNLPVRERRLGYLVQEGVLFPHLTVYRNIAYGLGNGK-GRTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRAALARALAPDPELILLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRILQTASPHELYRQPADL----------------


General information:
TITO was launched using:
RESULT:

Template: 3FVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1170 -124754 -106.63 -544.78
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -106.63
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_3FVQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FVQ-query.scw
PDB file : Tito_Scwrl_3FVQ.pdb: