Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRLENKTAVITGAATGIGQATAEVFANEGARVIIGDINKDQMEETVDAIRKNGGQAESFHLDVSDENSVKAFADQIKDACGTIDILFNNAGVDQEGGKVHEYPVDLFDRIIAVDLRGTFLCSKYLIPLMLEN-GGSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPLIDKLAGTKEQEMGEQFREANKWITPLGRLGQPKEMATVALFLASDDSSYVTGEDITADGGIMAYTWPGKMLIEEKWKEETK
4J2H Chain:A ((8-256))-FDLSGRRALVTGASRGIGQSIAVALAEAGAHVAVTARTVEGLAETRALIEKTGRRAVALAQDVRDVEACASVTRAAAEGLGGLDILVNNAGFENV-RPSFDVDEALWDTIVSTNLKGAFFCAQAAGRIMADANGGAIVNLCSLTSYVGIPTAVPYGASKSGLLGVTRALATEWAAHNIRVNAIAPGYFRTAMTAGFYED------EDWQSRMLEKIPQRRFGKESDIGGVAVFLCSDAAAYITGHCIPADGGYLAS-----------------


General information:
TITO was launched using:
RESULT:

Template: 4J2H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1415 -84338 -59.60 -340.07
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -59.60
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_4J2H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J2H-query.scw
PDB file : Tito_Scwrl_4J2H.pdb: