Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDV-------VGGLGDRARFAQADVTDEAAVSNALELA-DSLGPVRVVVNCAG-TGNAIRVLSRDGVF---PLAAFRKIVDINLVGTFNVLRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIRLDGAIRMAPR |
| 2CFC Chain:B ((4-192)) | ------VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGN-----SEAGVLHTTPVEQFDKVMAVNVRGIF----LGC-RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPM--------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95335 for 1452 contacts (-65.7/contact) +
2D Compatibility (PS) -18666 + (NN) -3620 + (LL) 5112
1D Compatibility (HY) -14400 + (ID) 3500
Total energy: -130409.0 ( -89.81 by residue)
QMean score : 0.511
|
|
|