Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSVMSHEFQLATAETWPNPWPMYRALRDHDPVHHVVPPQRPEYDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTPPMVMQDPPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRA-NGGGDIVTELFKPLPSMVVAHYLGVPEEDWTQFDGWTQAIVAANA-VDGATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLTSPVQG--LARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIVWSGGSYVRRPLSVPFRVTS |
| 3WVS Chain:A ((10-401)) | ----PESLSYPFGPDEGLALSESYTRARDTDGLIRVKLP--YGEPAWLATRYEDARLVLGDA-RFSRALSEEH-DPPRARKFNAQAKSMFNMDAPDHTRLRRLISKAFTIRRVEELRPKVHDLAHRLIDDMLAKGEPADLVADYALPIPTTVICELLGVPFEDREKFGRWTDAILSTSTLNPE---EGRVKRMELVGYIGGIIAARRAQPADDLISGMIEARD--VQDKLTEQELLDHCIGLLIAGHETTASQIPSFVYALLDQPQHWKRLLDDPELIPSAVEELFRFVPLGSGSAAPRYAREDIEVGGTLVRAGEPVLVALGAANRDGLRF-EDPEEIKLDRPSNHHIGFGHGIHHCLGAPLARLELQEALRALLERL-PTLKVAGDIAWKSEMMVRGPRSMPVGW-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206990 for 3274 contacts (-63.2/contact) +
2D Compatibility (PS) -41873 + (NN) -23190 + (LL) 616
1D Compatibility (HY) -14000 + (ID) 5800
Total energy: -291237.0 ( -88.95 by residue)
QMean score : 0.422
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